From the coffee and birds file: Juan Medrano et al. at the University of California, Davis have published the genome of Coffea arabica.
Category: Agriculture
Some links: 77
- A stunning 30-minute video documenting the end of Linotyping at the New York Times in 1978.
- Gabrielle Emmanuel’s series, “Unlocking Dyslexia,” begins with its definition.
- A lovely 5-minute video visit by Amanda Rodewald and Nick Bayly to a coffee finca: what’s the connection between shade-grown coffee and our neotropical migrants?
Best practices
Gustave Axelson reminds us of the shade coffee-and-birds connection. His visit to a farm owned by Veronica Sanchez and her family is particularly heartening.
Why?, I ask Sanchez. Why do all this, preserving and planting trees and messing with plastic bottle traps, and forgo the money in the here-and-now that her neighbor is getting?
“We use good practices and we have a peace of mind knowing we are producing something of organic quality,” if not certified organic, she said.
“If we apply poisons to the coffee, we also poison the animals from the land and sky, such as insects and birds, and in turn we pollute the water.” And that affects everything from her family to the people who drink her coffee, she said.
“Por eso son malas prácticas,” she said. These are malpractices.
Cardenalito
Species preservation and coffee agriculture meet: Ed Yong explains the conservation prospects for the Red Siskin (Spinus cucullata).
Messy
Stephanie Strom visits a big soybean/corn agricultural complex (spanning two states) and finds a old school farm practice that improves soil quality, reduces sediment runoff, and improves yields: cover crops.
Some links: 75
Birds, habitat, coffee agriculture—and 10 ways of looking at Northern Virginia.
- Rex Graham summarizes the research of Daniel Karp, who established the link between insectivorous birds on coffee plantations and control of the Coffee Berry Borer (Hypothenemus hampei).
- Ted Floyd goes birding at Bon Secour NWR and reminds us of the differences between National Parks and National Wildlife Refuges.
- Alonso Abugattas gives a shout-out for the most awesomest North American anatid, the Wood Duck.
Migrants
A reminder from BirdNote, with resource links, that shade-grown coffee is always a good idea.
Some links: 74
A mini-roundup of bird-related links:
- Alan Neuhauser reports estimates of avian mortality attributable to various energy sources. Although wind takes a toll, the big killer, on an absolute basis, is coal. It would be interesting to see this data on a per-kWh basis.
- GrrlScientist summarizes recent research that indicates certain bird species do better in areas under more intensive agriculture that leaves some patches undisturbed (so-called “land-sparing farming”) while others to better under “land-sharing” (e.g., intercropping in a shade-grown coffee plantation).
Drupes
Tamara Bonnemaison introduces us to Coffea arabica for Botany Photo of the Day.
Highbush
Dan Charles revisits the circumstances that led to the domestication of blueberries (Vaccinium sp.) by Elizabeth White and Frederick Coville. Blueberries are my favorite breakfast fruit, and my ex-wife did her doctoral research on blueberry pathogens. And extra serendipitous: I was in Hammonton just last month, and I saw some of the guys sweating out in the fields getting the crop in.
Gut check
Javier A. Ceja-Navarro et al. suggest a novel means of controlling the coffee berry borer (Hypothenemus hampei), as summarized by The Economist. The authors provide evidence that one of the species of bacteria that reside in the beetle’s digestive system, Pseudomonas fulva, detoxifies the caffeine that the coffee plant produces as a natural herbivore deterrent. Knock out the bacterium, perhaps with a targeted bacteriophage, and you knock out the pest.
Pondering
An op ed piece by Mark Lynas has been sitting in my clippings folder for several weeks. He makes the case for genetic engineering (GE) of food crops, with particular emphasis on its positive effects on yields in the developing world. While I can’t say that I’m entirely convinced, the column is persuasive — particularly when you consider that Lynas was once an activist against GMOs.
No one claims that biotech is a silver bullet. The technology of genetic modification can’t make the rains come on time or ensure that farmers in Africa have stronger land rights. But improved seed genetics can make a contribution in all sorts of ways: It can increase disease resistance and drought tolerance, which are especially important as climate change continues to bite; and it can help tackle hidden malnutritional problems like vitamin A deficiency.
At about the same time, Tania Lombrozo posted about the psychology of public acceptance of genetic engineering, or, as she put it rather bluntly in her lede,
Why do so many people oppose genetically modified organisms, or GMOs?
And, again, I’m not sure that her analysis applies to my skepticism, but the effect of the two writings leads me to consider why I am mildly opposed to expanding high tech agriculture. I think the core of my opposition lies in business models and practices, in the troubling consolidation that is taking place in the seed industry—not in subjective assessments of what constitutes a “natural” food. I look to the Union of Concerned Scientists, which offers this pro- and con- assessment:
We understand the potential benefits of the technology, and support continued advances in molecular biology, the underlying science. But we are critics of the business models and regulatory systems that have characterized early deployment of these technologies. GE has proved valuable in some areas (as in the contained use of engineered bacteria in pharmaceutical development), and some GE applications could turn out to play a useful role in food production.
Thus far, however, GE applications in agriculture have only made the problems of industrial monocropping worse. Rather than supporting a more sustainable agriculture and food system with broad societal benefits, the technology has been employed in ways that reinforce problematic industrial approaches to agriculture. Policy decisions about the use of GE have too often been driven by biotech industry public relations campaigns, rather than by what science tells us about the most cost-effective ways to produce abundant food and preserve the health of our farmland.
“Public relations campaigns:” does anyone remember when DDT was going to save the world, and Rachel Carson was called a crank?
The Union’s policy recommendations, among other things, call for food labeling laws, “so that consumers can make informed decisions about supporting GE applications in agriculture,” and I am definitely behind that idea.
I would like to think that I can be convinced by reason and evidence, so I could change my mind. But for now, I’m hanging out in the gray area.
Big strides
Robert Rice updates us on the progress of the Smithsonian’s Bird Friendly (BF) coffee program, and connects it to research programs here and abroad. The program is retailing north of 700 thousand pounds of java annually.
The biggest challenge facing the BF coffee program is marketing. Currently, less than 10% of the coffee certified as BF actually makes it into the market as such. This shortfall is partly due to the fact that BF coffee is certified organic (as a pre-requisite) and thus often is sold into the organic coffee stream as organic only—not being purchased or marketed as BF. We presently are working with a consultant to help us design plans to increase demand. Creating more demand will result in more shade coffee farms being certified as Bird Friendly, and that is our main goal of this program: conserving viable, quality habitat for migratory and resident birds in the tropics.
Some links: 72
Many conservation-oriented links piling up on my virtual desk, unremarked—so this needs must be a roundup post.
- Sharman Apt Russell describes her experiences collecting phenology data for Nature’s Notebook.
- Caren Cooper summarizes the findings in her recent paper in the Journal of Wildlife Management: birders and hunters alike are more likely to engage in conservation-supporting actitivies. Cooper’s “conservation superstars” are birders who are also hunters: these people are even more likely to donate money for conservation and do other things to preserve our legacy.
- Jason Goldman sings the praises of shade-grown coffee from an unexpected part of the world: Ethiopia, the land where Coffea was first domesticated.
- And Goldman summarizes a paper by A.M.I. Roberts et al., working with 222 years of phenology data collected by Robert Marsham and his descendants from the family estate in Norfolk, UK. For certain tree species, “winter chilling” turns out to be a more important factor determining leaf out than the warmth of “spring forcing.”
Three-way argument
I posted some notes on Perfecto, Vandemeer, and Wright, Nature’s Matrix: Linking Agriculture, Conservation, and Food Sovereignty (2009) to my Goodreads account.